preprocessing package#

Submodules#

preprocessing.grn_creation module#

preprocessing.grn_creation.create_GRN(cfg: ConfigParser) None[source]#

Infers a GRN using GRNBoost2 and uses it to construct a causal graph to impose onto GRouNdGAN.

Parameters:

cfg (ConfigParser) – Parser for config file containing GRN creation params.

preprocessing.preprocess module#

preprocessing.preprocess.preprocess(cfg: ConfigParser) None[source]#

Apply preprocessing steps.

Parameters:

cfg (ConfigParser) – Parser for config file containing preprocessing params.

Module contents#