Home¶
Welcome, to the documentation for self-hosting a PPI.bio server. This is the code that runs PPI.bio.
What is this?¶
PPI.bio is a web interface for RAPPPID and INTREPPPID, a deep-learning models for predicting protein-protein interactions (PPIs). This online interface allows you to use RAPPPID and INTREPPPID through your browser. This is the documentation about how you can run it on your own server. You can try out the live version on PPI.bio You can learn more on the about page.
New here?¶
Check-out the getting started page.
Are you using INTREPPID/RAPPPID?¶
If you are using INTREPPPID or RAPPPID, feel free to drop me a line at hello〔АТ〕jszym.com.
If you are using RAPPPID as part of a manuscript, kindly cite our paper in OUP Bioinformatics:
Joseph Szymborski , Amin Emad, RAPPPID: towards generalizable protein interaction prediction with AWD-LSTM twin networks, Bioinformatics, Volume 38, Issue 16, August 2022, Pages 3958–3967, https://doi.org/10.1093/bioinformatics/btac429
Contents: