Welcome to INTREPPPID’s documentation!

This is the documentation for the amino acid sequence-based PPI inference method, INTREPPPID. INTREPPPID is particularly well-suited to the cross-species use case.

By far, the easiest way to use INTREPPPID is through the https://PPI.bio website.

Contents:

• Installation
  • Using pip
  • From Source
• User Guide
  • Training
  • Inference
• Command Line Interface
  • Train
  • Infer
• Data
  • Pretrained Weights
  • Precomputed Datasets
  • Dataset Format
• API
  • Data
  • Network

Indices and tables

• Index

• Module Index

• Search Page